Render KBA report for a given species — render

This function will generate a KBA report using the 'opp-kba-report' RMarkdown template in OPPtools, with options to save the generated report as an .Rmd file in addition to the output PDF.

Usage

render_kba(
  params,
  kernel_smoother = "href/2",
  iterations = 5,
  level_ud = 95,
  save_rmd = FALSE,
  save_shp = TRUE,
  output_dir = "temp",
  out_format = "html_document",
  ...
)

Arguments

params: List of 16 parameter values used to generate report.
kernel_smoother: One of four options for kernel smoothers in kernel calculations: "href", "href/2", "step", or "bbmm". Defaults to href/2.
iterations: Numeric. Number of iterations to perform for track2KBA::repAssess. More iterations will result in a more accurate assessment, but take longer to run. Default 5.
level_ud: Numeric, from 0 to 100. Utilization distribution volume to extract from kernel densities. Defaults to 95.
save_rmd: Logical (T/F). Should the .Rmd file used to generate the PDF report be saved as well?
output_dir: Output directory for generated files. Defaults to 'temp'. If the directory does not exist, the script will create the directory.