Render diagnostic report for a given species — render

This function will generate a diagnostic report using the 'opp-diagnostic-report' RMarkdown template in OPPtools, with options to save the generated report as an .Rmd file in addition to the output PDF.

Usage

render_diagnostic(
  params,
  save_rmd = FALSE,
  output_dir = "temp",
  out_format = "html_document",
  ...
)

Arguments

params: List of 16 parameter values used to generate report.
save_rmd: Logical (T/F). Should the .Rmd file used to generate the PDF report be saved as well?
output_dir: Output directory for generated files. Defaults to 'temp'. If the directory does not exist, the script will create the directory.